Rapid, low-cost colorimetric detection of Salmonella Typhi bacteriophages for environmental surveillance

AUTHORS

Kesia Esther da Silva, Tuya Yokoyama, Shiva Ram Naga, Mamata Maharjan, Paulo César Pereira dos Santos, Karla N. Fisher, Jean T. Coulibaly, Jason R. Andrews, et al.

ABSTRACT

Typhoid fever remains a global public health challenge, especially in low- and middle-income countries where poor sanitation and limited access to clean water facilitate transmission. The lack of data on disease burden poses a significant barrier to adopting effective interventions such as vaccination programs. We developed a novel colorimetric assay for the detection of S. Typhi-specific bacteriophages (phages) in environmental water samples, providing an indirect indicator of S. Typhi contamination and insights into typhoid burden. We collected surface water samples from Brazil, Côte d’Ivoire, Nepal, and Niger, covering urban, peri-urban, and rural areas. We evaluated the colorimetric assay efficiency against the agar overlay plaque assay. Isolated phages were tested against various bacteria to assess their host range. The colorimetric assay demonstrated high sensitivity (100% concordance with double agar overlay) with a detection limit of 28 plaque-forming units per milliliter (PFU/mL), and results were obtained in 5.5 hours. Phage detection rates were highest in densely populated areas with poor sanitation, particularly in Kathmandu, Nepal (98% positivity in river samples) and Abidjan, Côte d’Ivoire (35.1% positivity in drainage samples). The detection of S. Typhi phages in Côte d’Ivoire is particularly important, as the burden of typhoid in the region was previously undocumented. Phages were not detected in rural and drinking water sources. Host range analyses demonstrated that all isolated phages were specific to S. Typhi. The novel colorimetric assay offers a rapid and sensitive method for detecting S. Typhi bacteriophages in environmental water. The scalability, low cost (~$2.40 per sample), and minimal equipment requirements suggest that this could be an effective tool for typhoid surveillance in resource-limited settings.

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